affinity: add call to setup function in threads

Threads created through TMThreadSpawn need to call the affinity
function by themselves.

src/counters.c

@@ -446,11 +446,15 @@ static void *SCPerfMgmtThread(void *arg)
         SCLogWarning(SC_ERR_THREAD_INIT, "Unable to set thread name");
     }
 
+    if (tv_local->thread_setup_flags != 0)
+        TmThreadSetupOptions(tv_local);
+
     /* Set the threads capability */
     tv_local->cap_flags = 0;
 
     SCDropCaps(tv_local);
 
+
     if (sc_perf_op_ctx == NULL) {
         SCLogError(SC_ERR_PERF_STATS_NOT_INIT, "Perf Counter API not init"
                    "SCPerfInitCounterApi() has to be called first");
@@ -507,6 +511,9 @@ static void *SCPerfWakeupThread(void *arg)
         SCLogWarning(SC_ERR_THREAD_INIT, "Unable to set thread name");
     }
 
+    if (tv_local->thread_setup_flags != 0)
+        TmThreadSetupOptions(tv_local);
+
     /* Set the threads capability */
     tv_local->cap_flags = 0;
 

src/detect-engine.c

@@ -88,6 +88,9 @@ static void *DetectEngineLiveRuleSwap(void *arg)
     /* block usr2.  usr2 to be handled by the main thread only */
     UtilSignalBlock(SIGUSR2);
 
+    if (tv_local->thread_setup_flags != 0)
+        TmThreadSetupOptions(tv_local);
+
     /* release TmThreadSpawn */
     TmThreadsSetFlag(tv_local, THV_INIT_DONE);
 

src/flow-manager.c

@@ -418,6 +418,9 @@ void *FlowManagerThread(void *td)
             SC_PERF_TYPE_UINT64,
             "NULL");
 
+    if (th_v->thread_setup_flags != 0)
+        TmThreadSetupOptions(th_v);
+
     memset(&ts, 0, sizeof(ts));
 
     FlowForceReassemblySetup();